miRBase entry: cpo-mir-125a

Stem-loop cpo-mir-125a

Accession

MI0038624

Description

Cavia porcellus cpo-mir-125a precursor miRNA

Sequence

UCCCUGAGACCCUUUAACCUGUGAggacauccagggucACAGGUGAGGUUCUUGGGAGCC
((((.((((.((((..((((((((((....))....)))))))))))).))))))))...

Structure

---    U    C    UA        ----  a 
   UCCC GAGA CCUU  ACCUGUGA    gg c
   |||| |||| ||||  ||||||||    ||  
   AGGG UUCU GGAG  UGGACAcu    cc a
CCG    -    U    --        ggga  u

Annotation confidence Not enough data

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Genome context

DS562925.1: 6339828-6339887 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-125a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-125a-5p

Accession	MIMAT0046965
Description	Cavia porcellus cpo-miR-125a-5p mature miRNA
Sequence	1 - UCCCUGAGACCCUUUAACCUGUGA - 24
Evidence	experimental Illumina [1]

Mature cpo-miR-125a-3p

Accession	MIMAT0046966
Description	Cavia porcellus cpo-miR-125a-3p mature miRNA
Sequence	39 - ACAGGUGAGGUUCUUGGGAGCC - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344