miRBase entry: cpo-mir-323b

Stem-loop cpo-mir-323b

Accession

MI0038726

Description

Cavia porcellus cpo-mir-323b precursor miRNA

Sequence

AGAGGUUGCCUGUGGCAUGUUCgcaucccuugugacgCACAAUCACGGUCAACCUCUCU
((((((((.((((((..((((((((.....))))).)))...)))))).))))))))..

Structure

--        C      -CA   -     u 
  AGAGGUUG CUGUGG   UGU UCgca c
  |||||||| ||||||   ||| ||||| c
  UCUCCAAC GGCACU   ACg agugu c
UC        U      AAC   c     u

Annotation confidence Not enough data

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Genome context

DS562966.1: 1118056-1118114 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from cpo-mir-323b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-323b-5p

Accession	MIMAT0047156
Description	Cavia porcellus cpo-miR-323b-5p mature miRNA
Sequence	1 - AGAGGUUGCCUGUGGCAUGUUC - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-323b-3p

Accession	MIMAT0047157
Description	Cavia porcellus cpo-miR-323b-3p mature miRNA
Sequence	38 - CACAAUCACGGUCAACCUCUCU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344