miRBase entry: cpo-mir-376c

Stem-loop cpo-mir-376c

Accession

MI0038755

Description

Cavia porcellus cpo-mir-376c precursor miRNA

Sequence

GUGGAUAUUCCUUCAAUGUUUAugucauuuaugguuaAACACAGAGGAAAUUCCAUGU
(((((..((((((...((((((..(((....))).))))))..))))))..)))))..

Structure

--     UA      CAA      ug   u 
  GUGGA  UUCCUU   UGUUUA  uca u
  |||||  ||||||   ||||||  |||  
  UACCU  AAGGAG   ACAAau  ggu u
UG     UA      -AC      -u   a

Annotation confidence Not enough data

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Genome context

DS562966.1: 1095062-1095119 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from cpo-mir-376c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-376c-5p

Accession	MIMAT0047213
Description	Cavia porcellus cpo-miR-376c-5p mature miRNA
Sequence	1 - GUGGAUAUUCCUUCAAUGUUUA - 22
Evidence	not_experimental

Mature cpo-miR-376c-3p

Accession	MIMAT0047214
Description	Cavia porcellus cpo-miR-376c-3p mature miRNA
Sequence	38 - AACACAGAGGAAAUUCCAUGU - 58
Evidence	not_experimental

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344