Stem-loop dre-mir-212-2

Accession

MI0039509

Description

Danio rerio dre-mir-212-2 precursor miRNA

Sequence

250 reads, 31 reads per million, 10 experiments

ucagaacuucaugACCUUGGCUCUAGACUGCUUACUgcuuauggaguccgacaguacagUAACAGUCUACAGUCAUGGCUACugaagucuggc
.((((.(((((((.((.(((((.(((((((.((((((.(..((........))..)))))))))))))).))))).)).)).)))))))))..

Structure

-u    a     -  A  U     C       C      c ua  gag 
  caga cuuca ug CC UGGCU UAGACUG UUACUg u  ug   u
  |||| ||||| || || ||||| ||||||| |||||| |  ||    
  gucu gaagu AU GG ACUGA AUCUGAC AAUgac a  ac   c
cg    -     C  C  U     C       -      - ug  agc 

Annotation confidence High

Genome context

chr10: 35644706-35644798 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dre-mir-212-2

Mature dre-miR-212-5p

• Accession: MIMAT0048650
• Description: Danio rerio dre-miR-212-5p mature miRNA
• Sequence: 14 - ACCUUGGCUCUAGACUGCUUACU - 36
• Evidence: not_experimental

Mature dre-miR-212-3p

• Accession: MIMAT0048651
• Description: Danio rerio dre-miR-212-3p mature miRNA
• Sequence: 60 - UAACAGUCUACAGUCAUGGCUAC - 82
• Evidence: not_experimental

References

1. PubMed ID: 26473382
   A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome
   "Fromm B, Billipp T, Peck LE, Johansen M, Tarver JE, King BL, Newcomb JM, Sempere LF, Flatmark K, Hovig E, Peterson KJ"
   "Annu Rev Genet (2015) 49:213-242