Stem-loop lhy-mir-2c

Accession

MI0043101

Description

Laevipilina hyalina lhy-mir-2c precursor miRNA

Sequence

ccgaagcuuugaaaaucgugcgugcccacgAUUGUCAAGGUGGCUGUUGAUGUGuuuaaauucucaUAUCACAGCCUGCUUUGAUGAGCUuggacauacaugaacacagcaaugcgaaag
.....((.(((....(((((.(((.(((.(.((((((((((((((((.((((((..........)))))))))))).)))))))))).).))).))).)))))......))).)).....

Structure

ccgaa  u   --aaaa     c   c   c A          -      U      uuua 
     gc uug      ucgug gug cca g UUGUCAAGGU GGCUGU GAUGUG    a
     || |||      ||||| ||| ||| | |||||||||| |||||| ||||||     
     cg aac      aguac uac ggu C AGUAGUUUCG CCGACA CUAUac    a
gaaag  u   gacaca     a   a   U G          U      -      ucuu 

Annotation confidence Not enough data

Genome context

scaffold155753_41.9: 1524-1583 []

Clustered miRNAs

6 other miRNAs are < 10 kb from lhy-mir-2c

Mature lhy-miR-2c-5p

• Accession: MIMAT0065464
• Description: Laevipilina hyalina lhy-miR-2c-5p mature miRNA
• Sequence: 31 - AUUGUCAAGGUGGCUGUUGAUGUG - 54
• Evidence: not_experimental

Mature lhy-miR-2c-3p

• Accession: MIMAT0065463
• Description: Laevipilina hyalina lhy-miR-2c-3p mature miRNA
• Sequence: 67 - UAUCACAGCCUGCUUUGAUGAGCU - 90
• Evidence: not_experimental

References