Accession
MI0048242
Description
Saccoglossus kowalevskii
sko-mir-4828c precursor miRNA
Sequence
acaaguuugcugugaagacuacuuacacucCAGUCUCAAUGUGUAUUUUCAUCUGUacucuguuaauacAGUAAAUACCAUUGAGAUUGCAgagucuguggucgccauucaacgaugaauc
......(((..(((..((((((..((.((.(((((((((((.((((((....(((((.........))))).))))))))))))))))).)).))..))))))..))).))).........
......(((..(((..((((((..((.((.(((((((((((.((((((....(((((.........))))).))))))))))))))))).)).))..))))))..))).))).........
Structure
---acaagu cu aa uu a c U UCAU cuc
uug gug gacuac ac cu CAGUCUCAAUG GUAUUU CUGUa u
||| ||| |||||| || || ||||||||||| |||||| ||||| g
aac uac cuggug ug gA GUUAGAGUUAC CAUAAA GAcau u
cuaaguagc -u cg uc a C - ---U aau
Annotation confidence
Not enough data
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Genome context
NW_003123408.1: 368417-368477 []
Clustered miRNAs
1 other miRNA is < 10 kb from sko-mir-4828c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sko-miR-4828c-5p
| Accession | MIMAT0074757 |
| Description | Saccoglossus kowalevskii sko-miR-4828c-5p mature miRNA |
| Sequence | 31 - CAGUCUCAAUGUGUAUUUUCAUCUGU - 56 |
| Evidence | not_experimental |
Mature sko-miR-4828c-3p
| Accession | MIMAT0074756 |
| Description | Saccoglossus kowalevskii sko-miR-4828c-3p mature miRNA |
| Sequence | 70 - AGUAAAUACCAUUGAGAUUGCA - 91 |
| Evidence | not_experimental |
References
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