Stem-loop gsa-mir-13373

Accession

MI0048787

Description

Gyrodactylus salaris gsa-mir-13373 precursor miRNA

Sequence

ugaguucuucagaaauacugaucuaucauuGAAGAUGGAAUAAAGGGACUCcaaaucgacggaauaguaauaauuguaacaauggggguuuugacaauacgauugguuggaucauucccuucuucaguugucuuugagaagguugaaagucagagggagauuuauccaaacaucaaaagcccccauuguuauuauuccaacgauugggaUUCACUUGUUUCCAUCUCGAAugguguucaaagaaacuucccuauuguaca
.((((((((.........(((..(((((((..((((((((..(((.((.(((.(((((..((((((.........(((((((((((((((((..........((((.((((((..((((((.......((.((((.((....)).)))).)))))))))))))).))))......)))))))))))))))))))))))..))))).))).)).)))..))))))))..))))))).)))))).)))))............

Structure

-----------u     -   cagaaauac   uc       GA        UA   G  C   a     ac      guaauaauu                 gacaauacga    u      au      cuucagu  u    g  a 
            gaguu cuu         uga  uaucauu  AGAUGGAA  AAG GA UCc aaucg  ggaaua         guaacaauggggguuuu          uugg uggauc  ucccuu       ug cuuu ag a
            ||||| |||         |||  |||||||  ||||||||  ||| || ||| |||||  ||||||         |||||||||||||||||          |||| ||||||  ||||||       || |||| ||  
            uucaa gaa         acu  gugguAA  UCUACCUU  UUC CU agg uuagc  ccuuau         uauuguuacccccgaaa          aacc auuuag  agggag       ac gaaa uu g
acauguuauccc     a   ---------   -u       GC        UG   A  U   g     aa      ---------                 ----acuaca    u      --      -------  u    g  g 

Annotation confidence Not enough data

Genome context

scf7180006950188: 19757-19956 [+]

Mature gsa-miR-13373-5p

• Accession: MIMAT0075621
• Description: Gyrodactylus salaris gsa-miR-13373-5p mature miRNA
• Sequence: 31 - GAAGAUGGAAUAAAGGGACUC - 51
• Evidence: not_experimental

Mature gsa-miR-13373-3p

• Accession: MIMAT0075622
• Description: Gyrodactylus salaris gsa-miR-13373-3p mature miRNA
• Sequence: 210 - UUCACUUGUUUCCAUCUCGAA - 230
• Evidence: not_experimental

References