Stem-loop tur-mir-5730a-1

Accession

MI0048847

Description

Tetranychus urticae tur-mir-5730a-1 precursor miRNA

Sequence

auucucacucuucucaaaaaucaaucgaucCGGUGGCUUCUUCCUCGGUGGAUGuugaauuaaaaccaUCACCGGGAGAAAGGCAUCUUAucgcuugauucaucagcaccauugucuaac
..................((((((.((((..((((.(((.((((.((((((..(((.......)))..)))))))))).))).))))..)))).))))))....................

Structure

--auucucacucuucucaaa      u    cC    G   C    U      AU   ga 
                    aaucaa cgau  GGUG CUU UUCC CGGUGG  Guu  a
                    |||||| ||||  |||| ||| |||| ||||||  |||  u
                    uuaguu gcuA  CUAC GAA GAGG GCCACU  caa  u
caaucuguuaccacgacuac      c    UU    G   A    -      ac   aa 

Annotation confidence Not enough data

Genome context

emb|HE587309|: 1096142-1096261 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from tur-mir-5730a-1

Mature tur-miR-5730a-5p

• Accession: MIMAT0023050
• Description: Tetranychus urticae tur-miR-5730a-5p mature miRNA
• Sequence: 31 - CGGUGGCUUCUUCCUCGGUGGAUG - 54
• Evidence: experimental ; Illumina [1]

Mature tur-miR-5730a-3p

• Accession: MIMAT0023051
• Description: Tetranychus urticae tur-miR-5730a-3p mature miRNA
• Sequence: 69 - UCACCGGGAGAAAGGCAUCUUA - 90
• Evidence: experimental ; Illumina [1]

References