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miRBase |
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Stem-loop sequence osa-MIR156h |
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Accession | MI0000660 (change log) | |||||
Description | Oryza sativa miR156h stem-loop | |||||
Gene family | MIPF0000008; MIR156 | |||||
Literature search |
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120 open access papers mention osa-MIR156h | |||||
Stem-loop |
- - a c a caucgaucuaucaaucuucccuucgacaggauagcuagauagaaagaaagagag 5' aguugacagaa gaga gugagcac cagcggc ag cug g ||||||||||| |||| |||||||| ||||||| || ||| 3' ucgacugucuu cucu cacucgug gucgccg uc gac c u u c - - auaguaguaguaguaaaguagagagagagagagagagaagguaccggcggcugc |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence osa-miR156h-5p |
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Accession | MIMAT0031156 |
Sequence |
4 - ugacagaagagagugagcac - 23 |
Deep sequencing | 568662 reads, 2 experiments |
Evidence | by similarity; MI0000178 |
Database links |
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Mature sequence osa-miR156h-3p |
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Accession | MIMAT0031157 |
Sequence |
164 - gcucacuucucuuucugucagc - 185 |
Deep sequencing | 118 reads, 2 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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References |
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1 |
PMID:12101121
"MicroRNAs in plants"
Genes Dev. 16:1616-1626(2002).
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2 |
PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"
PLoS Pathog. 7:e1002176(2011).
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