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miRBase |
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Stem-loop sequence osa-MIR160a |
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Accession | MI0000663 (change log) | ||||
Description | Oryza sativa miR160a stem-loop | ||||
Gene family | MIPF0000032; MIR160 | ||||
Literature search |
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63 open access papers mention osa-MIR160a | ||||
Stem-loop |
c c a u ac caug 5' gugugc uggcucc uguaugccac ca guag caacc g |||||| ||||||| |||||||||| || |||| ||||| 3' cguacg accgagg acgugcggug gu cauc guugg u a a g - -c ucug |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence osa-miR160a-5p |
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Accession | MIMAT0000628 |
Previous IDs | osa-miR160a |
Sequence |
4 - ugccuggcucccuguaugcca - 24 |
Deep sequencing | 519 reads, 2 experiments |
Evidence | by similarity; MI0000192 |
Database links |
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Mature sequence osa-miR160a-3p |
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Accession | MIMAT0022851 |
Sequence |
67 - gcgugcaaggagccaagcaug - 87 |
Deep sequencing | 215 reads, 2 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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References |
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1 |
PMID:12101121
"MicroRNAs in plants"
Genes Dev. 16:1616-1626(2002).
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2 |
PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"
PLoS Pathog. 7:e1002176(2011).
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