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miRBase |
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Stem-loop sequence osa-MIR160c |
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Accession | MI0000665 (change log) | ||||
Description | Oryza sativa miR160c stem-loop | ||||
Gene family | MIPF0000032; MIR160 | ||||
Literature search |
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57 open access papers mention osa-MIR160c | ||||
Stem-loop |
c c cu - a aaa c 5' ggaaugugc uggcucc uguaugcca cauc uag gcaac cuu u ||||||||| ||||||| ||||||||| |||| ||| ||||| ||| 3' ccuuauacg accgagg acgugcggu guag auc cguug gag g a c ag u - -ga c |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence osa-miR160c-5p |
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Accession | MIMAT0000630 |
Previous IDs | osa-miR160c |
Sequence |
7 - ugccuggcucccuguaugcca - 27 |
Deep sequencing | 521 reads, 2 experiments |
Evidence | by similarity; MI0000190 |
Database links |
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Mature sequence osa-miR160c-3p |
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Accession | MIMAT0022853 |
Sequence |
75 - gcgugcacggagccaagcaua - 95 |
Deep sequencing | 201 reads, 2 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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References |
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1 |
PMID:12101121
"MicroRNAs in plants"
Genes Dev. 16:1616-1626(2002).
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2 |
PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"
PLoS Pathog. 7:e1002176(2011).
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