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miRBase |
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Stem-loop sequence osa-MIR166b |
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Accession | MI0000671 (change log) | ||||
Description | Oryza sativa miR166b stem-loop | ||||
Gene family | MIPF0000004; MIR166 | ||||
Literature search |
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73 open access papers mention osa-MIR166b | ||||
Stem-loop |
cau a uu cu - uuuua - - - -- cu --c uccuagcuu u 5' gggagccuuuu uuug ggggaaug gucugg cgggg cuac auuu cucuc ucuuuu gau aucuu uuucu gauc gauc u ||||||||||| |||| |||||||| |||||| ||||| |||| |||| ||||| |||||| ||| ||||| ||||| |||| |||| 3' cccucgggaag aaac ccccuuac cggacc gcucu gaug uaga gagag agagaa cug uagaa aaaga cuag cuag u -ac c uu ag a -ucug u u a ac -- auu cuaaacucu u |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence osa-miR166b-5p |
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Accession | MIMAT0022856 |
Sequence |
22 - ggaauguugucuggcucgggg - 42 |
Deep sequencing | 228 reads, 2 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Mature sequence osa-miR166b-3p |
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Accession | MIMAT0000636 |
Previous IDs | osa-miR166b |
Sequence |
168 - ucggaccaggcuucauucccc - 188 |
Deep sequencing | 36908 reads, 2 experiments |
Evidence | by similarity; MI0000201 |
Database links |
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References |
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1 |
PMID:12101121
"MicroRNAs in plants"
Genes Dev. 16:1616-1626(2002).
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2 |
PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"
PLoS Pathog. 7:e1002176(2011).
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