Accession
MI0000671
Description
Oryza sativa
osa-MIR166b precursor miRNA
Gene family
MIPF0000004;
MIR166
Literature search
73 open access papers mention osa-MIR166b
(271 sentences)
(271 sentences)
Sequence
27888
reads,
19371
reads per million, 2 experiments
gggagccuuuucauuuugaggGGAAUGUUGUCUGGCUCGGGGcuacuuuuaauuucucucucuuuugauaucuucuuuucucgaucuccuagcuugaucuuuugaucucucaaaucgaucuuaagaaaaagaucagucaaagagaugagaguagaugucuguagaucUCGGACCAGGCUUCAUUCCCCccaaacagaagggcuccc
(((((((((((...((((.((((((((..((((((.((((((((((.....(((((((((((((((((((((((..(((((.((((.........((((....)))).........))))...))))))))))..))).)))))).))))).))))....)))).)))))).))))))..)))))))).))))..)))))))))))
(((((((((((...((((.((((((((..((((((.((((((((((.....(((((((((((((((((((((((..(((((.((((.........((((....)))).........))))...))))))))))..))).)))))).))))).))))....)))).)))))).))))))..)))))))).))))..)))))))))))
Structure
cau a UU C - uuuua - - - -- cu --c uccuagcuu u
gggagccuuuu uuug ggGGAAUG GUCUGG UCGGGG cuac auuu cucuc ucuuuu gau aucuu uuucu gauc gauc u
||||||||||| |||| |||||||| |||||| |||||| |||| |||| ||||| |||||| ||| ||||| ||||| |||| ||||
cccucgggaag aaac CCCCUUAC CGGACC GGCUcu gaug uaga gagag agagaa cug uagaa aaaga cuag cuag u
-ac c UU A a -ucug u u a ac -- auu cuaaacucu u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
Chr6: 30327084-30327289 [-]
Database links
Mature osa-miR166b-3p
| Accession | MIMAT0000636 |
| Description | Oryza sativa osa-miR166b-3p mature miRNA |
| Sequence | 168 - UCGGACCAGGCUUCAUUCCCC - 188 |
| Evidence | not_experimental |
| Database links |
|
Mature osa-miR166b-5p
| Accession | MIMAT0022856 |
| Description | Oryza sativa osa-miR166b-5p mature miRNA |
| Sequence | 22 - GGAAUGUUGUCUGGCUCGGGG - 42 |
| Evidence |
experimental
Illumina [2] |
| Database links |
|
References
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