Stem-loop gga-mir-125b-2

Accession

MI0001175

Description

Gallus gallus gga-mir-125b-2 precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

27 open access papers mention gga-mir-125b-2
(65 sentences)

Sequence

524599 reads, 6293 reads per million, 5 experiments

aucagacuuuuccuagUCCCUGAGACCCUAACUUGUGAgguuuuguagcaacaaucACAAGUCAGGCUCUUGGGACCUaggcggagggga
......((((.(((((((((.((((.(((.((((((((....((((....)))))))))))).))).)))))))).))))).))))....

Structure

aucaga    u     -    U    C   A        gguu    a 
      cuuu ccuag UCCC GAGA CCU ACUUGUGA    uugu g
      |||| ||||| |||| |||| ||| ||||||||    ||||  
      gagg ggaUC AGGG UUCU GGA UGAACAcu    aaca c
--aggg    c     C    -    C   C        ----    a 

Annotation confidence High

Genome context

chr1: 99051079-99051168 [+]

Mature gga-miR-125b-5p

• Accession: MIMAT0001105
• Description: Gallus gallus gga-miR-125b-5p mature miRNA
• Sequence: 17 - UCCCUGAGACCCUAACUUGUGA - 38
• Evidence: experimental ; Illumina [2]

Mature gga-miR-125b-3p

• Accession: MIMAT0026493
• Description: Gallus gallus gga-miR-125b-3p mature miRNA
• Sequence: 57 - ACAAGUCAGGCUCUUGGGACCU - 78
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None:


3. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45