miRBase entry: 15592404

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

PubMed ID 15592404
Authors "International Chicken Genome Sequencing Consortium"
Journal "Nature
Volume 432
Pages 695-716

There are 112 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
gga-mir-29a MI0001166 670 chr1 3434776 3434864 + High
gga-mir-29b-1 MI0001167 238 chr1 3433759 3433839 + High
gga-let-7i MI0001168 753 chr1 33060797 33060880 + High
gga-mir-135a-2 MI0001169 262 chr1 46334585 46334684 + High
gga-let-7a-3 MI0001171 73726 chr1 71291481 71291556 + High
gga-let-7b MI0001172 13203 chr1 71292310 71292394 + High
gga-mir-99a MI0001173 2162 chr1 99018041 99018121 + High
gga-let-7c MI0001174 12632 chr1 99018794 99018877 + High
gga-mir-125b-2 MI0001175 6293 chr1 99051079 99051168 + High
gga-mir-155 MI0001176 44 chr1 102485099 102485161 + -
gga-mir-222a MI0001177 415 chr1 110650030 110650127 + High
gga-mir-221 MI0001178 930 chr1 110650534 110650632 + High
gga-mir-92-1 MI0001179 1297 chr1 148023263 148023340 - High
gga-mir-19b MI0001180 125 chr1 148023376 148023462 - High
gga-mir-20a MI0001181 1777 chr1 148023499 148023596 - High
gga-mir-19a MI0001182 109 chr1 148023685 148023765 - High
gga-mir-18a MI0001183 127 chr1 148023819 148023911 - High
gga-mir-17 MI0001184 961 chr1 148023974 148024058 - High
gga-mir-16-1 MI0001185 392 chr1 169399051 169399134 - High
gga-mir-15a MI0001186 73 chr1 169399193 169399275 - -
gga-mir-26a MI0001187 8541 chr2 4575294 4575370 + High
gga-mir-153 MI0001188 338 chr2 8846565 8846651 - High
gga-mir-148a MI0001189 8720 chr2 32178254 32178321 - High
gga-mir-196-2 MI0001190 1901 chr2 32707474 32707567 - -
gga-mir-138-1 MI0001191 595 chr2 40874171 40874266 - High
gga-mir-128-2 MI0001192 1115 chr2 45670113 45670196 + High
gga-mir-187 MI0001193 432 chr2 83889612 83889697 + High
gga-mir-32 MI0001194 255 chr2 84498503 84498572 - High
gga-mir-133a-1 MI0001195 219 chr2 102812734 102812820 - -
gga-mir-1a-2 MI0001196 76776 chr2 102815860 102815944 - -
gga-mir-30d MI0001198 16716 chr2 142761260 142761323 - High
gga-mir-216a MI0001200 18 chr3 318076 318181 - -
gga-mir-217 MI0001201 57 chr3 315408 315514 - High
gga-mir-194 MI0001202 4 chr3 18822853 18822927 + -
gga-mir-215 MI0001203 140 chr3 18823159 18823263 + -
gga-mir-30a MI0001204 21107 chr3 82629084 82629155 + High
gga-mir-30c-2 MI0001205 1744 chr3 82653698 82653769 + High
gga-mir-133b MI0001206 25 chr3 108040385 108040468 - -
gga-mir-206 MI0001207 62 chr3 108045182 108045257 - -
gga-mir-223 MI0001208 20 chr4 249565 249664 + -
gga-mir-18b MI0001209 27 chr4 3995020 3995103 - -
gga-mir-106 MI0001210 190 chr4 3995151 3995231 - High
gga-mir-302a MI0001211 0 chr4 57456844 57456910 + -
gga-mir-218-1 MI0001212 197 chr4 75581203 75581311 - High
gga-mir-103-2 MI0001213 6009 chr4 89095068 89095150 - High
gga-mir-203a MI0001214 417 chr5 50769283 50769380 + -
gga-mir-107 MI0001215 111 chr6 19401516 19401596 - -
gga-mir-10b MI0001216 14423 chr7 16343590 16343699 - -
gga-mir-128-1 MI0001217 1024 chr7 30766323 30766404 + High
gga-mir-181a-1 MI0001218 15585 chr8 2005169 2005272 + High
gga-mir-181b-1 MI0001219 2028 chr8 2005358 2005446 + High
gga-mir-199-2 MI0001220 1409 chr8 4652464 4652571 + -
gga-mir-137 MI0001221 888 chr8 12517007 12517102 + High
gga-mir-16-2 MI0001222 387 chr9 22276898 22276991 - High
gga-mir-15b MI0001223 27 chr9 22277073 22277163 - -
gga-mir-190a MI0001224 128 chr10 4206001 4206085 - High
gga-mir-204-2 MI0001225 10 chr10 5628577 5628677 + -
gga-mir-7-2 MI0001226 440 chr10 13134720 13134818 - High
gga-mir-184 MI0001227 648 chr10 19996770 19996843 + -
gga-mir-138-2 MI0001228 541 chr11 2104525 2104607 - High
gga-mir-140 MI0001229 10668 chr11 19310301 19310395 + High
gga-let-7g MI0001230 4570 chr12 2971911 2971993 - High
gga-let-7d MI0001232 130 chr12 6091058 6091160 - High
gga-let-7f MI0001233 33796 chr12 6092103 6092189 - High
gga-let-7a-1 MI0001234 72969 chr12 6092517 6092606 - High
gga-mir-146a MI0001235 1662 chr13 7795767 7795865 - High
gga-mir-103-1 MI0001236 6009 chr13 4689830 4689907 + -
gga-mir-218-2 MI0001237 198 chr13 4563943 4564037 + High
gga-mir-205b MI0001238 2 chr1 1273692 1273789 - -
gga-mir-130b MI0001239 188 chr15 399151 399227 - High
gga-mir-301a MI0001240 13 chr15 406743 406835 - High
gga-mir-130a MI0001241 115 chr15 407968 408050 - High
gga-mir-181b-2 MI0001242 2007 chr17 9983772 9983856 + High
gga-mir-181a-2 MI0001243 15346 chr17 9982132 9982222 + -
gga-mir-126 MI0001244 16166 chr17 8233313 8233396 - High
gga-mir-199-1 MI0001245 1408 chr17 5571579 5571672 + High
gga-mir-1a-1 MI0001247 76765 chr20 8315740 8315810 + -
gga-mir-133a-2 MI0001248 219 chr20 8326963 8327058 + -
gga-mir-200a MI0001249 1057 chr21 2591937 2592023 - High
gga-mir-200b MI0001250 1057 chr21 2594262 2594346 - High
gga-mir-34a MI0001251 50 chr21 3262992 3263100 - -
gga-mir-124b MI0001252 7 chr23 2223486 2223578 + -
gga-mir-1b MI0001254 1405 chr23 4357025 4357088 + -
gga-mir-133c MI0001255 51 chr23 4357164 4357242 + High
gga-mir-30e MI0001256 38349 chr23 4946132 4946227 + High
gga-mir-30c-1 MI0001257 2036 chr23 4947355 4947443 + High
gga-mir-100 MI0001258 13390 chr24 3335097 3335176 + High
gga-let-7a-2 MI0001259 72699 chr24 3343196 3343267 + High
gga-mir-34b MI0001260 299 chr24 5539134 5539217 + High
gga-mir-34c MI0001261 771 chr24 5539871 5539944 + High
gga-let-7j MI0001262 73377 chr26 1639928 1640010 - -
gga-let-7k MI0001263 40055 chr26 1640128 1640210 - High
gga-mir-135a-3 MI0001264 262 chr26 2124003 2124098 - High
gga-mir-29c MI0001265 663 chr26 2698811 2698899 - -
gga-mir-29b-2 MI0001266 253 chr26 2699722 2699801 - High
gga-mir-205a MI0001267 10 chr26 3076070 3076165 + -
gga-mir-196-1 MI0001268 2028 chr27 3775036 3775130 + High
gga-mir-204-1 MI0001271 11 chrZ 35181161 35181264 - -
gga-mir-7-1 MI0001272 460 chrZ 40078117 40078225 - High
gga-mir-23b MI0001273 268 chrZ 41649166 41649251 + High
gga-mir-27b MI0001274 1634 chrZ 41649402 41649498 + High
gga-mir-24 MI0001275 1785 chrZ 41649935 41650002 + High
gga-mir-31 MI0001276 71 chrZ 78512252 78512345 - High
gga-mir-122-1 MI0001277 771 chrZ 761121 761197 + High
gga-mir-183 MI0001278 88 chr1 844362 844459 - -
gga-mir-7b MI0001279 3 chrW 3067226 3067335 - -
gga-mir-122-2 MI0001280 771 chrW 2525186 2525262 - High
gga-mir-142 MI0001281 1347 chr19 510413 510500 - High
gga-mir-196-3 MI0001282 2177 chr33 1025337 1025444 + -
gga-mir-9-2 MI0001283 54839 chrZ 60469242 60469328 + High
gga-mir-196-4 MI0023559 1901 None None -
gga-mir-196-5 MI0023560 1901 None None -



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