Stem-loop gga-mir-155

Accession

MI0001176

Description

Gallus gallus gga-mir-155 precursor miRNA

Literature search

128 open access papers mention gga-mir-155
(819 sentences)

Sequence

507366 reads, 382.0 reads per million, 198 experiments

ugUUAAUGCUAAUCGUGAUAGGGGuuuuuaccucugaaugaCUCCUACAUGUUAGCAUUAACA
((((((((((((.((((.((((((((((((....)))).))))))))))))))))))))))))

Structure

            U    A        -    c 
ugUUAAUGCUAA CGUG UAGGGGuu uuua c
|||||||||||| |||| |||||||| ||||  
ACAAUUACGAUU GUAC AUCCUCag aagu u
            -    -        u    c 

Annotation confidence High

Comments

This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context

1: 102588225-102588287 [+]

Mature gga-miR-155-5p

• Accession: MIMAT0001106
• Description: Gallus gallus gga-miR-155-5p mature miRNA
• Sequence: 3 - UUAAUGCUAAUCGUGAUAGGGG - 24
• Evidence: not_experimental

Mature gga-miR-155-3p

• Accession: MIMAT0051201
• Description: Gallus gallus gga-miR-155-3p mature miRNA
• Sequence: 42 - CUCCUACAUGUUAGCAUUAACA - 63
• Evidence: not_experimental

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716