Accession
MI0001184
Description
Gallus gallus
gga-mir-17 precursor miRNA mir-17
Gene
family?
family?
RF00051;
mir-17
Literature search
88 open access papers mention gga-mir-17
(342 sentences)
(342 sentences)
Sequence
1401067
reads,
1115.0
reads per million, 258 experiments
gucagaguaauguCAAAGUGCUUACAGUGCAGGUAGUGauauauagaaccuACUGCAGUGAAGGCACUUGUAGCauuauguugac
(((((.(((((((..((((((((.((.(((((...((..........))...))))).)).))))))))...))))))).)))))
(((((.(((((((..((((((((.((.(((((...((..........))...))))).)).))))))))...))))))).)))))
Structure
a -CA A G GUA Gaua
gucag guaaugu AAGUGCUU CA UGCAG GU u
||||| ||||||| |||||||| || ||||| ||
caguu uauuaCG UUCACGGA GU ACGUC ca a
g AUG A G Auc agau
Annotation confidence
High
Do you think this miRNA is real?
Genome context
1: 148017067-148017151 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from gga-mir-17
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gga-miR-17-5p
| Accession | MIMAT0001114 |
| Description | Gallus gallus gga-miR-17-5p mature miRNA |
| Sequence | 14 - CAAAGUGCUUACAGUGCAGGUAGUG - 38 |
| Evidence |
experimental
cloned [2] |
| Database links |
|
| Predicted targets |
|
Mature gga-miR-17-3p
| Accession | MIMAT0001115 |
| Description | Gallus gallus gga-miR-17-3p mature miRNA |
| Sequence | 52 - ACUGCAGUGAAGGCACUUGUAGC - 74 |
| Evidence | not_experimental |
| Database links |
|
| Predicted targets |
|
References
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