Stem-loop gga-mir-26a

Accession

MI0001187

Description

Gallus gallus gga-mir-26a precursor miRNA

Gene family

MIPF0000043; mir-26

Literature search

21 open access papers mention gga-mir-26a
(145 sentences)

Sequence

710304 reads, 8541 reads per million, 5 experiments

gucaccuggUUCAAGUAAUCCAGGAUAGGCuguauccauuccugcuggCCUAUUCUUGGUUACUUGCACUGggaggc
(((.((((((.(((((((((.(((((((((((((........))).)))))))))).))))))))).)))))).)))

Structure

   a      U         C          -   ucc 
guc ccuggU CAAGUAAUC AGGAUAGGCu gua   a
||| |||||| ||||||||| |||||||||| |||    
cgg ggGUCA GUUCAUUGG UCUUAUCCgg cgu   u
   a      C         U          u   ccu 

Annotation confidence High

Genome context

chr2: 4575294-4575370 [+]

Mature gga-miR-26a-5p

• Accession: MIMAT0001118
• Description: Gallus gallus gga-miR-26a-5p mature miRNA
• Sequence: 10 - UUCAAGUAAUCCAGGAUAGGC - 30
• Evidence: experimental ; cloned [2], Illumina [3]

Mature gga-miR-26a-3p

• Accession: MIMAT0026501
• Description: Gallus gallus gga-miR-26a-3p mature miRNA
• Sequence: 49 - CCUAUUCUUGGUUACUUGCACUG - 71
• Evidence: experimental ; Illumina [3]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. PubMed ID: 18256158
   MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs
   "Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Watson M, Nair V"
   "J Virol (2008) 82:4007-4015


3. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None:


4. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45