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miRBase |
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Stem-loop sequence gga-mir-217 |
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Accession | MI0001201 (change log) | |||||||||
Description | Gallus gallus miR-217 stem-loop | |||||||||
Gene family | MIPF0000077; mir-217 | |||||||||
Literature search |
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7 open access papers mention gga-mir-217 | |||||||||
Stem-loop |
aaagucacugcaga cuu c c a c c u - aau 5' guu gaugu g ag ua ugcau aggaacugau g gau a ||| ||||| | || || ||||| |||||||||| | ||| 3' caa cuacg c uc gu acgua uccuugacua c cug a -----------gaa -au a u c u a c a acu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken. |
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence gga-miR-217-5p |
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Accession | MIMAT0001132 |
Sequence |
32 - uacugcaucaggaacugauuggau - 55 |
Deep sequencing | 1597 reads, 5 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Predicted targets |
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Mature sequence gga-miR-217-3p |
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Accession | MIMAT0026513 |
Sequence |
68 - ccaucaguuccuaaugcauugcc - 90 |
Deep sequencing | 2 reads, 2 experiments |
Evidence | experimental; Illumina [2] |
Predicted targets |
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References |
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1 |
PMID:15592404
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"
Nature. 432:695-716(2004).
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2 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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