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miRBase |
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Stem-loop sequence gga-mir-130a |
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Accession | MI0001241 (change log) | |||||||||
Description | Gallus gallus miR-130a stem-loop | |||||||||
Gene family | MIPF0000034; mir-130 | |||||||||
Literature search |
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10 open access papers mention gga-mir-130a | |||||||||
Stem-loop |
ug u a uc a g - a 5' cuguug ccag gcccuuuu uguuguacu cu g ca u |||||| |||| |||||||| ||||||||| || | || 3' gacggu gguu cgggaaaa auaacguga ga u gu u -- c a uu c g a a |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence gga-miR-130a-5p |
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Accession | MIMAT0026532 |
Sequence |
15 - gcccuuuuucuguuguacuacu - 36 |
Deep sequencing | 218 reads, 5 experiments |
Evidence | experimental; Illumina [3] |
Predicted targets |
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Mature sequence gga-miR-130a-3p |
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Accession | MIMAT0001167 |
Sequence |
52 - cagugcaauauuaaaagggcau - 73 |
Deep sequencing | 51946 reads, 5 experiments |
Evidence | experimental; cloned [2], Illumina [3] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:15592404
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"
Nature. 432:695-716(2004).
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2 |
PMID:18256158
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs"
J Virol. 82:4007-4015(2008).
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3 |
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Unpublished.
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4 |
PMID:18256158
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs"
J Virol. 82:4007-4015(2008).
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5 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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