Stem-loop gga-mir-126

Accession

MI0001244

Description

Gallus gallus gga-mir-126 precursor miRNA mir-126

Gene
family

RF00701; mir-126

Literature search

18 open access papers mention gga-mir-126
(95 sentences)

Sequence

1132577 reads, 16166 reads per million, 5 experiments

gcuggugacggccCAUUAUUACUUUUGGUACGCGcugugacacuucaaacUCGUACCGUGAGUAAUAAUGCGCuguggucagca
((((((.(((((.(((((((((((.(((((((.....(((....)))....))))))).))))))))))).))))).)))))).

Structure

-      g     c           U       CGcug   c 
 gcuggu acggc CAUUAUUACUU UGGUACG     uga a
 |||||| ||||| ||||||||||| |||||||     |||  
 cgacug uguCG GUAAUAAUGAG GCCAUGC     acu c
a      g     C           U       -Ucaa   u 

Annotation confidence High

Genome context

chr17: 8233313-8233396 [-]

Mature gga-miR-126-5p

• Accession: MIMAT0003723
• Description: Gallus gallus gga-miR-126-5p mature miRNA
• Sequence: 14 - CAUUAUUACUUUUGGUACGCG - 34
• Evidence: experimental ; cloned [2], Northern [2]

Mature gga-miR-126-3p

• Accession: MIMAT0001169
• Description: Gallus gallus gga-miR-126-3p mature miRNA
• Sequence: 51 - UCGUACCGUGAGUAAUAAUGCGC - 73
• Evidence: experimental ; cloned [2], Northern [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None:


3. PubMed ID: 16750530
   Identification of microRNAs from different tissues of chicken embryo and adult chicken
   "Xu H, Wang X, Du Z, Li N"
   "FEBS Lett (2006) 580:3610-3616