Accession
MI0001688
Description
Oryza sativa
osa-MIR437 precursor miRNA
Literature search
8 open access papers mention osa-MIR437
(13 sentences)
(13 sentences)
Sequence
69190
reads,
313.0
reads per million, 142 experiments
cccucuguuucauauuguauuguguuuuaguuuuguuguaagucaaaauucuuuUACUUUGACCAAGUUUGUAGUaaaauaauuaacaucuaaaauaccaaauaaauacacuauugagacauauuucuugguugauuuuucuauaaacuuggucAAAGUUAGAGAAGUUUGACUUaggacaaaacuaaacaccuuaugauauggaacagaggg
(((((((((((((((((((..((((((.(((((((((.(((((((((.((((((.(((((((((((((((((((.(((((................(((((..(((((..((....))...))))).)))))..))))).))))))))))))))))))).)))))).))))))))).)))))))))))))))..)))))))))))))))))))
(((((((((((((((((((..((((((.(((((((((.(((((((((.((((((.(((((((((((((((((((.(((((................(((((..(((((..((....))...))))).)))))..))))).))))))))))))))))))).)))))).))))))))).)))))))))))))))..)))))))))))))))))))
Structure
uu u g a U U aauuaacaucuaaaau au -ca a
cccucuguuucauauugua guguuu aguuuuguu uaagucaaa uucuuu ACUUUGACCAAGUUUGUAG aaaau accaa aaaua cu u
||||||||||||||||||| |||||| ||||||||| ||||||||| |||||| ||||||||||||||||||| ||||| ||||| ||||| ||
gggagacaagguauaguau cacaaa ucaaaacag aUUCAGUUU AAGAGA UGAAAcugguucaaauauc uuuua ugguu uuuau ga u
uc - g G U u --------------gu -c aca g
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
2: 17050336-17050548 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from osa-MIR437
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature osa-miR437-5p
| Accession | MIMAT0055981 |
| Description | Oryza sativa osa-miR437-5p mature miRNA |
| Sequence | 55 - UACUUUGACCAAGUUUGUAGU - 75 |
| Evidence |
experimental
unknown |
Mature osa-miR437-3p
| Accession | MIMAT0001586 |
| Description | Oryza sativa osa-miR437-3p mature miRNA |
| Sequence | 155 - AAAGUUAGAGAAGUUUGACUU - 175 |
| Evidence |
experimental
cloned [1], Illumina [2] |
| Database links |
|
References
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