Stem-loop sequence gma-MIR156d

Accession

MI0001770 (change log)

Description

Glycine max miR156d stem-loop

Gene family

MIPF0000008; MIR156

Literature search

40 open access papers mention gma-MIR156d
(171 sentences)

Stem-loop

   --cuacuu   aauu     u u         -              u  -   u       uuauauaauauauagc 
5'         ggu    aaggu g ugacagaag auagagagcacaga ga uga augcaua                a
           |||    ||||| | ||||||||| |||||||||||||| || ||| |||||||                 
3'         ccg    uucca c acugucuuc uaucucucguguuu cu auu uacgugu                g
   cuuuaccu   --ac     - u         a              c  c   c       uaaguaguacucaagg 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr8: 3896578-3896728 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0001770

Mature sequence gma-miR156d

• Accession: MIMAT0001672
• Sequence: 21 - uugacagaagauagagagcac - 41
• Evidence: experimental; 454 [1]

References

1. "Conservation and divergence of microRNA families in plants" Dezulian T, Palatnik JF, Huson DH, Weigel D http://genomebiology.com/2005/6/11/p13 (2005).
2. PMID:18402695 "Novel and nodulation-regulated microRNAs in soybean roots" Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O BMC Genomics. 9:160(2008).