Stem-loop gma-MIR167b

Accession

MI0001778

Description

Glycine max gma-MIR167b precursor miRNA

Gene family

MIPF0000023; MIR167_1

Literature search

26 open access papers mention gma-MIR167b
(203 sentences)

Sequence

aagggucacaaaggaaaaagUGAAGCUGCCAGCAUGAUCUAgcuuugguuagugggagcgagagagugcuaacccucacuaggucaugcugugcuagccucacuccuuccuauuuggagac
....(((.((((((((..(((((.((((((((((((((((((....(((((((....((......)))))))))....))))))))))))).)).))).)))))..)))))..)))..)))

Structure

aagg   -a   --     aa     A   -  -             cuuu       ggga  ga 
    guc  caa  aggaa  agUGA GCU GC CAGCAUGAUCUAg    gguuagu    gc  g
    |||  |||  |||||  ||||| ||| || |||||||||||||    |||||||    ||   
    cag  guu  uccuu  ucacu cga cg gucguacuggauc    ccaaucg    ug  a
----   ag   ua     cc     c   u  u             acuc       ----  ag 

Annotation confidence Not enough data

Genome context

chr2: 14838068-14838188 [-]

Mature gma-miR167b

• Accession: MIMAT0001680
• Description: Glycine max gma-miR167b mature miRNA
• Sequence: 21 - UGAAGCUGCCAGCAUGAUCUA - 41
• Evidence: experimental ; 454 [1]

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13


2. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160