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miRBase |
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Stem-loop sequence gma-MIR172b |
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Accession | MI0001781 (change log) | ||||
Description | Glycine max miR172b stem-loop | ||||
Gene family | MIPF0000035; MIR172 | ||||
Literature search |
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28 open access papers mention gma-MIR172b | ||||
Stem-loop |
uugac guuu g a - -u -a g a uau u au 5' agucguu gc gauguagcaucaucaagauuc caug caaa ga ggugggu gg c ga gca c ||||||| || ||||||||||||||||||||| |||| |||| || ||||||| || | || ||| c 3' ucggcaa cg cuacgucguaguaguucuaag gugu guuu cu cuaccua cc g cu cgu a -aauu auac a a a uu gg a - --u - ga |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence gma-miR172b-5p |
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Accession | MIMAT0020921 |
Sequence |
23 - guagcaucaucaagauucac - 42 |
Evidence | experimental; Illumina [3] |
Mature sequence gma-miR172b-3p |
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Accession | MIMAT0001683 |
Previous IDs | gma-miR172b |
Sequence |
114 - agaaucuugaugaugcugcau - 134 |
Evidence | experimental; 454 [1], Northern [1], Illumina [3] |
References |
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1 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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2 |
PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots"
BMC Genomics. 9:160(2008).
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3 |
PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"
BMC Genomics. 12:307(2011).
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