miRBase entry: dre-mir-459

Stem-loop dre-mir-459


Accession
MI0002180
Description
Danio rerio dre-mir-459 precursor miRNA
Gene family
MIPF0001322; mir-459

Literature search
3 open access papers mention dre-mir-459
(3 sentences)

Sequence

24 reads, 5 reads per million, 4 experiments
ccucuugcucUCAGUAACAAGGAUUCAUCCUGuugugguacucaaauccaaCAGGGAAUCUCUGUUACUGGGGuuaagguu
..(((((.(((((((((((.((((((..(((((((.(((......)))))))))))))))).))))))))))).)))))..

Structure
cc     c           A      AU       u   ac 
  ucuug ucUCAGUAACA GGAUUC  CCUGuug ggu  u
  ||||| ||||||||||| ||||||  ||||||| |||   
  ggaau GGGGUCAUUGU UCUAAG  GGACaac cua  c
uu     u           C      --       -   aa 


Annotation confidence Not enough data
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Genome context
chr1: 1575483-1575563 [+]

Database links

Mature dre-miR-459-5p

Accession MIMAT0001886
Description Danio rerio dre-miR-459-5p mature miRNA
Sequence 11 - UCAGUAACAAGGAUUCAUCCUG - 32
Evidence experimental
cloned [1]

Mature dre-miR-459-3p

Accession MIMAT0003408
Description Danio rerio dre-miR-459-3p mature miRNA
Sequence 52 - CAGGGAAUCUCUGUUACUGGGG - 73
Evidence experimental
cloned [1]
Database links

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293