Stem-loop dre-mir-461

Accession

MI0002183

Description

Danio rerio dre-mir-461 precursor miRNA

Sequence

8 reads, 11 reads per million, 4 experiments

auuuugaaaaUCAGGAAUGGGCUAAAUGCCAAucaaaauaaagcaagucuuugguccagaccagguaauacaaaauaag
((((((...(((.((..((((((((((((.............)))....)))))))))..)).)))....))))))...

Structure

---      -aaa   A  AA         ----   CAAuc 
   auuuug    aUC GG  UGGGCUAAA    UGC     a
   ||||||    ||| ||  |||||||||    |||     a
   uaaaac    ugg cc  accugguuu    acg     a
gaa      auaa   a  ag         cuga   aaaua 

Annotation confidence Not enough data

Genome context

chr16: 15562681-15562759 [+]

Mature dre-miR-461

• Accession: MIMAT0001889
• Description: Danio rerio dre-miR-461 mature miRNA
• Sequence: 11 - UCAGGAAUGGGCUAAAUGCCAA - 32
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293