Stem-loop sequence dre-mir-461

AccessionMI0002183
DescriptionDanio rerio miR-461 stem-loop
Stem-loop
   ---      -aaa   a  aa         ----   caauc 
5'    auuuug    auc gg  ugggcuaaa    ugc     a
      ||||||    ||| ||  |||||||||    |||     a
3'    uaaaac    ugg cc  accugguuu    acg     a
   gaa      auaa   a  ag         cuga   aaaua 
Get sequence
Deep sequencing
8 reads, 5.7 reads per million, 3 experiments
Confidence
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Genome context
Coordinates (Zv9) Overlapping transcripts
16: 17942992-17943070 [+]
intergenic
Database links

Mature sequence dre-miR-461

Accession MIMAT0001889
Sequence

11 - 

ucaggaaugggcuaaaugccaa

 - 32

Get sequence
Deep sequencing3 reads, 3 experiments
Evidence experimental; cloned [1]

References

1
PMID:15937218 "The developmental miRNA profiles of zebrafish as determined by small RNA cloning" Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T Genes Dev. 19:1288-1293(2005).