Stem-loop mmu-mir-675

Accession

MI0004123

Symbol

MGI: Mir675

Description

Mus musculus mmu-mir-675 precursor miRNA mir-675

Gene
family

RF00897; mir-675

Literature search

38 open access papers mention mmu-mir-675
(296 sentences)

Sequence

1591 reads, 39 reads per million, 34 experiments

ugcggcccagggacUGGUGCGGAAAGGGCCCACAGUggacuugguacaCUGUAUGCCCUAACCGCUCAGUcccugggucuggca
(((((((((((((((((.((((..(((((..((((((.........))))))..)))))..))))))))))))))))))..)))

Structure

   --              U    AA     CC      gac 
ugc  ggcccagggacUGG GCGG  AGGGC  ACAGUg   u
|||  |||||||||||||| ||||  |||||  ||||||   u
acg  cugggucccUGACU CGCC  UCCCG  UGUCac   g
   gu              -    AA     UA      aug 

Annotation confidence Medium

Genome context

chr7: 142577064-142577147 [-]

Mature mmu-miR-675-5p

• Accession: MIMAT0003725
• Description: Mus musculus mmu-miR-675-5p mature miRNA
• Sequence: 15 - UGGUGCGGAAAGGGCCCACAGU - 36
• Evidence: experimental ; MPSS [1], Illumina [2-3]

Mature mmu-miR-675-3p

• Accession: MIMAT0003726
• Description: Mus musculus mmu-miR-675-3p mature miRNA
• Sequence: 49 - CUGUAUGCCCUAACCGCUCAGU - 70
• Evidence: experimental ; MPSS [1], Illumina [2-3]

References

1. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


2. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


3. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771