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miRBase |
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Stem-loop sequence mtr-MIR398a |
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Accession | MI0005599 (change log) | |||||
Description | Medicago truncatula miR398a stem-loop | |||||
Gene family | MIPF0000107; MIR398 | |||||
Literature search |
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4 open access papers mention mtr-MIR398a | |||||
Stem-loop |
u a a ug aucau gu 5' cucagagg gugac cugagaacacaagau auua auaau a |||||||| ||||| ||||||||||||||| |||| ||||| u 3' gaguuucc cacug gacucuuguguuuua ugau uguug u u c - gu --cau gu |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence mtr-miR398a-5p |
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Accession | MIMAT0022935 |
Sequence |
8 - ggagugacacugagaacacaag - 29 |
Evidence | experimental; Illumina [3] |
Mature sequence mtr-miR398a-3p |
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Accession | MIMAT0011085 |
Previous IDs | mtr-miR398a |
Sequence |
73 - uguguucucaggucaccccuu - 93 |
Evidence | experimental; Northern [2] |
References |
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1 |
"
Unpublished (2007).
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2 |
PMID:19555436
"Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families"
New Phytol. 184:85-98(2009).
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3 |
PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"
Genes Dev. 25:2540-2553(2011).
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