miRBase entry: mtr-MIR169b

Stem-loop mtr-MIR169b


Accession
MI0005625
Description
Medicago truncatula mtr-MIR169b precursor miRNA
Gene family
MIPF0000037; MIR169_2

Literature search
12 open access papers mention mtr-MIR169b
(53 sentences)

Sequence

gagugCAGCCAAGGAUGACUUGCCGGuaauauaucuaauuccuugguuucuuccggcaaguuguucuugacuacauu
.((((.((.(((((((((((((((((......(((.........))).....))))))))))))))))).)).))))

Structure
g    C  C                 uaauau   uaa 
 agug AG CAAGGAUGACUUGCCGG      auc   u
 |||| || |||||||||||||||||      |||   u
 uuac uc guucuuguugaacggcc      ugg   c
-    a  a                 -uucuu   uuc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mtr-miR169b

Accession MIMAT0011111
Description Medicago truncatula mtr-miR169b mature miRNA
Sequence 6 - CAGCCAAGGAUGACUUGCCGG - 26
Evidence experimental
Illumina [1]

References


  1. "Bonnet E"
    (2007) None:

  2. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553