Stem-loop ppt-MIR1074

Accession

MI0006040

Description

Physcomitrella patens ppt-MIR1074 precursor miRNA

Sequence

gaguugcagguuuugcuggauuuguggucAGGGUUGUUAGUUGUGUUGAUggguuaauuucauaacuaacaacaucaacccaucaacacaacgaacaacccugaccacaaauccaacaauuuuuuucaga
............(((.((((((((((((((((((((((.((((((((((((((((.....................)))))))))))))))).)))))))))))))))))))))).)))...........

Structure

gaguugcagguu   c                      A                aauuucaua 
            uug uggauuuguggucAGGGUUGUU GUUGUGUUGAUggguu         a
            ||| |||||||||||||||||||||| ||||||||||||||||         c
            aac accuaaacaccagucccaacaa caacacaacuacccaa         u
-agacuuuuuuu   a                      g                cuacaacaa 

Annotation confidence Not enough data

Genome context

Chr17: 8240339-8240468 [+]

Mature ppt-miR1074

• Accession: MIMAT0005204
• Description: Physcomitrella patens ppt-miR1074 mature miRNA
• Sequence: 30 - AGGGUUGUUAGUUGUGUUGAU - 50
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769