Stem-loop smo-MIR171a

Accession

MI0006056

Description

Selaginella moellendorffii smo-MIR171a precursor miRNA

Gene family

MIPF0000030; MIR171_1

Sequence

cgagcgagagcgauauuggcucugcucaaucgcaugacgcugcugcaucgcacgaaaaauuugcgaugggaauggaucgauggagucgcagcagaggcaugagaUUGAGCCGUGCCAAUAUCACUgguguuuuuc
.(((((..((.(((((((((.(.((((((((.((((.(.(((((((((..(((((...((((.(...).))))...))).))..)).))))))).).)))).)))))))).).))))))))).))..)))))...

Structure

--c     ag  c         u u        g    a g       -  cg  -   aaa    g g 
   gagcg  ag gauauuggc c gcucaauc caug c cugcugc au  ca cga   auuu c  
   |||||  || ||||||||| | |||||||| |||| | ||||||| ||  || |||   |||| | a
   uuugu  UC CUAUAACCG G CGAGUUag guac g gacgacg ug  gu gcu   uaag g  
cuu     gg  A         U C        a    g a       c  ag  a   agg    g u 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR171a

• Accession: MIMAT0005223
• Description: Selaginella moellendorffii smo-miR171a mature miRNA
• Sequence: 105 - UUGAGCCGUGCCAAUAUCACU - 125
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769