Stem-loop smo-MIR536

Accession

MI0006062

Description

Selaginella moellendorffii smo-MIR536 precursor miRNA

Sequence

guguuuuugaugcacucagcuugacacggccgugcuuggaagucuggaaaguuuucuuucacgcuccacugaugcugcugcugcaaugcgugcugacucucucucucucucuuggUCGUGUCAAGCUGUGUGCAUCacaacgcauugcucguuuuca
(((((..((((((((.((((((((((((((((....((((.((...(((((....)))))..))))))...(((((((....)))..)))).....................)))))))))))))))).)))))))).)))))..............

Structure

--------------     uu        u                ----------------------------------------ugcu    a  cug     u 
              guguu  ugaugcac cagcuugacacggccg                                            ugga gu   gaaag u
              |||||  |||||||| ||||||||||||||||                                            |||| ||   |||||  
              cgcaa  aCUACGUG GUCGAACUGUGCUggu                                            accu cg   cuuuc u
acuuuugcucguua     -c        U                ucucucucucucucucagucgugcguaacgucgucgucguaguc    -  -ca     u 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR536

• Accession: MIMAT0005229
• Description: Selaginella moellendorffii smo-miR536 mature miRNA
• Sequence: 116 - UCGUGUCAAGCUGUGUGCAUC - 136
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769