Stem-loop smo-MIR1082a

Accession

MI0006065

Description

Selaginella moellendorffii smo-MIR1082a precursor miRNA

Gene family

MIPF0000422; MIR1082

Sequence

cacacauaagauuuugaggcagGCGUUGGCCUGCUGGCCGGUGgcgagcucgcgaucuugauugagagcucucgcucucucucucucucucucucucucuccucgcaucgccucgccucgccguccagcaggccaauaccucacucgagaucuuguugga
..((.(((((((((((((..(((.(((((((((((((.((((((((((...(((((...((..((((((....))))))..)).......................)))))))))))..)))).))))))))))))).)))..)))))))))))))))..

Structure

ca  c             gc   C             C    --      cuc     --------------------cuu  uu      u 
  ca auaagauuuugag  agG GUUGGCCUGCUGG CGGU  Ggcgag   gcgau                       ga  gagagc c
  || |||||||||||||  ||| ||||||||||||| ||||  ||||||   |||||                       ||  ||||||  
  gu uguucuagagcuc  ucc uaaccggacgacc gccg  ccgcuc   cgcua                       cu  cucucg u
ag  -             ac   a             u    cu      ---     cgcuccucucucucucucucucu  cu      c 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR1082a

• Accession: MIMAT0005232
• Description: Selaginella moellendorffii smo-miR1082a mature miRNA
• Sequence: 23 - GCGUUGGCCUGCUGGCCGGUG - 43
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769