Stem-loop smo-MIR1089

Accession

MI0006073

Description

Selaginella moellendorffii smo-MIR1089 precursor miRNA

Sequence

gacgaccucaaggaucaucuugcugcugugcaaacaauccuaaaugaucuuaaggaugugggagcaagcauaaaggauggaggaagggugacgagcaccaacucugcuucuucuucauccucuauauuugcuuccccauccuucAGAUCAUCUAGGAUUGUUUGCacaguagcaagaugaucu
...........(((((((((((((((((((((((((((((((.(((((((.(((((((.(((((((((.(((.(((((((((((.((((...(((......))).)))).))))))))))).))).))))))))).))))))).))))))).)))))))))))))))))))))))))))))))

Structure

gacgaccucaa                               a       u       u         c   a           a    gac   ca 
           ggaucaucuugcugcugugcaaacaauccua augaucu aaggaug gggagcaag aua aggauggagga gggu   gag  c
           ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||| ||||||||||| ||||   |||   
           ucuaguagaacgaugacaCGUUUGUUAGGAU UACUAGA uuccuac ccuucguuu uau uccuacuucuu uucg   cuc  c
-----------                               C       c       c         a   c           c    --u   aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR1089

• Accession: MIMAT0005242
• Description: Selaginella moellendorffii smo-miR1089 mature miRNA
• Sequence: 145 - AGAUCAUCUAGGAUUGUUUGC - 165
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769