Stem-loop smo-MIR1101

Accession

MI0006088

Description

Selaginella moellendorffii smo-MIR1101 precursor miRNA

Sequence

ugugugcuugGGCAUUCUCUCGAAACAAGUGcagcgaaaaacgcagagcugcgucuccgcuacacUUGUUUGCAGAGAAUGCCCAAcuggaaaaau
.......(((((((((((((..(((((((((.((((....(((((....)))))...)))).)))))))))..)))))))))))))..........

Structure

---ugugugc             CG         c    aaaa     g 
          uugGGCAUUCUCU  AAACAAGUG agcg    acgca a
          |||||||||||||  ||||||||| ||||    |||||  
          AACCCGUAAGAGA  UUUGUUcac ucgc    ugcgu g
uaaaaagguc             CG         a    -cuc     c 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR1101-5p

• Accession: MIMAT0005257
• Description: Selaginella moellendorffii smo-miR1101-5p mature miRNA
• Sequence: 11 - GGCAUUCUCUCGAAACAAGUG - 31
• Evidence: experimental ; 454 [1]

Mature smo-miR1101-3p

• Accession: MIMAT0005258
• Description: Selaginella moellendorffii smo-miR1101-3p mature miRNA
• Sequence: 66 - UUGUUUGCAGAGAAUGCCCAA - 86
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769