Accession
MI0006231
Description
Chlamydomonas reinhardtii
cre-MIR1171 precursor miRNA
Sequence
gggaguggaguggagUGGAGUGGAGUGGAGUGGAGUGGgagugggagugggugcaagggcgugggugggugggugcggcgggcgcgcuugucgugacaccuugacucaucaccccgccuccaacgccuccaacgccucgcuacucccccugcaacccccuuccccacgcccccgucccuccgcuccc
((((((((((.(((.(((.(.((.((((.(.((((.(((((.((((((((.((...((((((.((.(((((...(.((((((.(.(...((((........))))....).))))))).)...))))))).)))))))))))))))).))....))).))))))))).)))))))))))))))))))
((((((((((.(((.(((.(.((.((((.(.((((.(((((.((((((((.((...((((((.((.(((((...(.((((((.(.(...((((........))))....).))))))).)...))))))).)))))))))))))))).))....))).))))))))).)))))))))))))))))))
Structure
u g A U A A U U ---- u g caa g u ggu c c c -cuu uga
gggaguggag gga UGG G GG GUGG G GGAG GGg ag gggagugg ug gggcgu gg gggug g ggcggg g g gucg c
|||||||||| ||| ||| | || |||| | |||| ||| || |||||||| || |||||| || ||||| | |||||| | | ||||
cccucgccuc ccu gcc c cc cacc c cuuc ccc uc cccucauc gc uccgca cc uccgc c ccgccc c c cagu a
- - - - g - - c aacg c - --- a - aac u - a uacu ucc
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
scaffold_51: 419396-419582 [-]
Database links
Mature cre-miR1171
| Accession | MIMAT0005430 |
| Description | Chlamydomonas reinhardtii cre-miR1171 mature miRNA |
| Sequence | 16 - UGGAGUGGAGUGGAGUGGAGUGG - 38 |
| Evidence |
experimental
cloned [1] |
References
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