Stem-loop sequence bra-MIR824

Accession MI0006439
Description Brassica rapa miR824 stem-loop
Gene family MIPF0000442; MIR824
Stem-loop
    -----    ug    u               u             -uuuuguuu     guuca          aaucuguagugaguauuaaggaaaauagcuuguucaacauaucacacuacucuuuuagaaacaaaacuauauuuuagaugcuuuuccagcuugauauacguuguuuuguuauguauaccuguauucucccggcuaccaaaacguuaagaaauaaggugaacaucuccccaaaaccugcauccaauuagaaaggucuaggucacagccauuacuugcuaucucucgauuaagcuauuuuauu 
ccuc     gagu  ucuu caugucuagaccauu gugagaagggauu         gcacc     ccccacucuc                                                                                                                                                                                                                                                 u
||||     ||||  |||| ||||||||||||||| |||||||||||||         |||||     ||||||||||                                                                                                                                                                                                                                                 c
ggag     cuca  ggag guguagaucugguag uacucuucccuga         cgugg     ggggugaggg                                                                                                                                                                                                                                                 u
    uuacu    gu    c               c             uuauugggu     ---aa          guucaauaaaugauacuucauuugaucacaucgauucaucacguucuaaguucaagaaucgauaguacuuuauggagauugugaggucugucuccaaacuguagagcauccuuuuuacagacaggcuucacaccguaucagguuuuuguuuuauaauacauacgucguaggucuuuacaguacuuaccugaauuacauaaaauaaaauaugaauugaggacuuacuagacuacuacuacua 
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Mature sequence bra-miR824

Accession MIMAT0005598
Sequence

22 - 

uagaccauuugugagaaggga

 - 42

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Evidence experimental; Northern [1]

References

1
PMID:17704216 "MicroRNA-mediated regulation of stomatal development in Arabidopsis" Kutter C, Schob H, Stadler M, Meins F Jr, Si-Ammour A Plant Cell. 19:2417-2429(2007).