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miRBase |
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Stem-loop sequence osa-MIR1431 |
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Accession | MI0006971 (change log) | ||||
Description | Oryza sativa miR1431 stem-loop | ||||
Literature search |
3 open access papers mention osa-MIR1431 | ||||
Stem-loop |
--gggauucagaaagga ----- u c ug cg g c u a auaaaugaguuuauggaucgacccacuugcaucu 5' aagac uuaggg ugcaagcgggucaac cg aacc cuuaua g aaaau agu gguaacccgu c ||||| |||||| ||||||||||||||| || |||| |||||| | ||||| ||| |||||||||| 3' uucug gauccc acguucgcccgguug gc uugg gaauau c uuuua uca cuauugggca u guacgaacaauucucga ccgua u a gu au a a u - cacaaaagugcagcaccaggcuaaacggcgugaa |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence osa-miR1431 |
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Accession | MIMAT0005965 |
Sequence |
185 - uuugcgaguuggcccgcuugc - 205 |
Deep sequencing | 19 reads, 2 experiments |
Evidence | experimental; MPSS [1], Northern [1], cloned [2] |
Database links |
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References |
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1 |
PMID:18353984
"Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)"
Proc Natl Acad Sci U S A. 105:4951-4956(2008).
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2 |
PMID:18312648
"Identification of novel and candidate miRNAs in rice by high throughput sequencing"
BMC Plant Biol. 8:25(2008).
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