Stem-loop gga-mir-1306

Accession

MI0007057

Description

Gallus gallus gga-mir-1306 precursor miRNA

Literature search

4 open access papers mention gga-mir-1306
(8 sentences)

Sequence

948 reads, 11 reads per million, 5 experiments

uccACCACCUCCCCUGCAAACGUCCAGUgacgcagagguaaUGGACGUUGGCUCUGGUGGUGAUggaca
((((.((((.((...((.((((((((...((......))..)))))))).))...)).)))).))))..

Structure

--    C    U  CCU  A        GUg  gc 
  uccA CACC CC   GC AACGUCCA   ac  a
  |||| |||| ||   || ||||||||   ||   
  aggU GUGG GG   CG UUGCAGGU   ug  g
ac    A    U  UCU  G        -aa  ga 

Annotation confidence High

Genome context

chr15: 1294136-1294204 [+]

Mature gga-miR-1306-3p

• Accession: MIMAT0007329
• Description: Gallus gallus gga-miR-1306-3p mature miRNA
• Sequence: 42 - UGGACGUUGGCUCUGGUGGUGAU - 64
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1306-5p

• Accession: MIMAT0026763
• Description: Gallus gallus gga-miR-1306-5p mature miRNA
• Sequence: 4 - ACCACCUCCCCUGCAAACGUCCAGU - 28
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18430245
   Deep sequencing of chicken microRNAs
   Burnside J, Ouyang M, Anderson A, Bernberg E, Lu C, Meyers BC, Green PJ, Markis M, Isaacs G, Huang E, Morgan RW
   BMC Genomics (2008) 9:185


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45