Stem-loop gga-mir-1457

Accession

MI0007062

Description

Gallus gallus gga-mir-1457 precursor miRNA

Sequence

2040 reads, 179 reads per million, 5 experiments

gcauccacaaccuccuugggcaaccuguuccagugcgucaccuuuaaauuagauuaucaCACUACAGGCUGCAAAAGGGUUugugag
.....(((((.(.((((..(((.(((((...((((.(....((.......)).....).))))))))).)))..))))).)))))..

Structure

gcauc     c u    gg   a     ucc    c -ucac  uu 
     cacaa c ccuu  gca ccugu   agug g     cu  a
     ||||| | ||||  ||| |||||   |||| |     ||  a
     guguU G GGAA  CGU GGACA   UCAC c     ga  a
---ga     U -    AA   C     ---    a uauua  uu 

Annotation confidence Not enough data

Genome context

chr2: 137176405-137176491 [-]

Mature gga-miR-1457

• Accession: MIMAT0007335
• Description: Gallus gallus gga-miR-1457 mature miRNA
• Sequence: 60 - CACUACAGGCUGCAAAAGGGUU - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18430245
   Deep sequencing of chicken microRNAs
   Burnside J, Ouyang M, Anderson A, Bernberg E, Lu C, Meyers BC, Green PJ, Markis M, Isaacs G, Huang E, Morgan RW
   BMC Genomics (2008) 9:185