Stem-loop sequence gma-MIR164a

Accession

MI0007209 (change log)

Previous IDs

gma-MIR164

Description

Glycine max miR164 stem-loop

Gene family

MIPF0000045; MIR164

Literature search

17 open access papers mention gma-MIR164a
(42 sentences)

Stem-loop

   -   u  u           ca             --uc  -u   aucu 
5'  agc cc uguuggagaag  gggcacgugcaag    uc  ugg    c
    ||| || |||||||||||  |||||||||||||    ||  |||     
3'  uug gg acaaccucuuc  cucgugcacguuu    ag  acc    a
   u   -  c           cc             ccca  uc   guaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr19: 49681250-49681344 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0007209

Mature sequence gma-miR164a

• Accession: MIMAT0007354
• Previous IDs: gma-miR164
• Sequence: 11 - uggagaagcagggcacgugca - 31
• Evidence: experimental; 454 [1], Northern [1]

References

1. PMID:18402695 "Novel and nodulation-regulated microRNAs in soybean roots" Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O BMC Genomics. 9:160(2008).