miRBase entry: gma-MIR1514a

Stem-loop gma-MIR1514a


Accession
MI0007226
Description
Glycine max gma-MIR1514a precursor miRNA
Gene family
MIPF0000694; MIR1514

Literature search
5 open access papers mention gma-MIR1514a
(12 sentences)

Sequence

cuuugcuauuUUCAUUUUUAAAAUAGGCAUUggggucccuucuuguuccuccuuuuccuuuccuaucccaAUGCCUAUUUUAAAAUGAAAAcaacgaua
..(((...((((((((((.(((((((((((((((((............................)))))))))))))))))))))))))))...)))..

Structure
cu   cua          U                 cccuucuuguucc 
  uug   uuUUCAUUUU AAAAUAGGCAUUggggu             u
  |||   |||||||||| |||||||||||||||||              
  agc   AAAAGUAAAA UUUUAUCCGUAacccua             c
au   aac          -                 uccuuuccuuuuc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr7: 43120760-43120858 [-]

Database links

Mature gma-miR1514a-5p

Accession MIMAT0007372
Description Glycine max gma-miR1514a-5p mature miRNA
Sequence 11 - UUCAUUUUUAAAAUAGGCAUU - 31
Evidence experimental
454 [1], Illumina [2]

Mature gma-miR1514a-3p

Accession MIMAT0032031
Description Glycine max gma-miR1514a-3p mature miRNA
Sequence 71 - AUGCCUAUUUUAAAAUGAAAA - 91
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18402695
    Novel and nodulation-regulated microRNAs in soybean roots
    Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
    BMC Genomics (2008) 9:160

  2. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153