miRBase entry: gma-MIR1514b

Stem-loop gma-MIR1514b


Accession
MI0007227
Description
Glycine max gma-MIR1514b precursor miRNA
Gene family
MIPF0000694; MIR1514

Literature search
5 open access papers mention gma-MIR1514b
(12 sentences)

Sequence

cuuugcuauuUUCAUUUUUAAAAUAGACAUUgggcuucuucuuguuccucuuuuuuccuuccaauuccgauuugguccuaAUGCCUAUUUUAAAAUGAAAAcaaugaua
........((((((((((.(((((((.(((((((((...((...........................))...)).))))))).)))))))))))))))))........

Structure
cuuugcua          U       A       -  ucu  uuguuccucuuu 
        uuUUCAUUUU AAAAUAG CAUUggg cu   uc            u
        |||||||||| ||||||| ||||||| ||   ||            u
        AAAAGUAAAA UUUUAUC GUAaucc gg   ag            u
auaguaac          -       C       u  uuu  ccuuaaccuucc 


Annotation confidence Not enough data
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Genome context
chr17: 1491521-1491629 [+]

Database links

Mature gma-miR1514b-5p

Accession MIMAT0007373
Description Glycine max gma-miR1514b-5p mature miRNA
Sequence 11 - UUCAUUUUUAAAAUAGACAUU - 31
Evidence experimental
454 [1]

Mature gma-miR1514b-3p

Accession MIMAT0032032
Description Glycine max gma-miR1514b-3p mature miRNA
Sequence 81 - AUGCCUAUUUUAAAAUGAAAA - 101
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18402695
    Novel and nodulation-regulated microRNAs in soybean roots
    Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
    BMC Genomics (2008) 9:160

  2. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153