miRBase entry: gma-MIR1518

Dead hairpin entry

Stem-loop gma-MIR1518


Accession
MI0007231
Description
Glycine max gma-MIR1518 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
2 open access papers mention gma-MIR1518
(2 sentences)

Sequence

13392 reads, 57.0 reads per million, 167 experiments
augugcaaaauguguugUAAAGUGAAUAUCAUCGGCACAUaggucaugagaucaacauugacagauuuacaggcagccuugacgugagaacacgauaaauguuuagccugauauUCACCACAAUCACACUUUUGGaau
...(.(((((((((((((...((((((((((..(((((((((((..(((((((..........))))).))....))))...((((....))))....))))...))))))))))))).)))).)))).))))).)..

Structure
aug g     -    -    AAA          UC   ---    -------------------    --ca  -     aaca 
   u caaaa ugug uugU   GUGAAUAUCA  GGC   ACAU                   aggu    ug agauc    u
   | ||||| |||| ||||   ||||||||||  |||   ||||                   ||||    || |||||     
   a GUUUU ACAC AACA   CACUuauagu  ccg   ugua                   uccg    ac uuuag    u
-ua G     C    U    --C          --   auu    aauagcacaagagugcagu    acgg  a     acag