Stem-loop gma-MIR1520d

Accession

MI0007233

Description

Glycine max gma-MIR1520d precursor miRNA

Gene family

MIPF0000581; MIR1520

Literature search

10 open access papers mention gma-MIR1520d
(17 sentences)

Sequence

augaugacuaucacaugucauguucugauuggauguuaacucuaugaaaaaacaaauacauuguuguuuucauugaucaAUCAGAACAUGACACGUGACAAuuaucaucca
(((((((...((((.(((((((((((((((((........((.((((((((((((.....))))).))))))).))))))))))))))))))).))))...)))))))...

Structure

---       cua    a                 auguuaac  u       -     a 
   augauga   ucac ugucauguucugauugg        uc augaaaa aacaa u
   |||||||   |||| |||||||||||||||||        || ||||||| ||||| a
   uacuauu   AGUG ACAGUACAAGACUAacu        ag uacuuuu uuguu c
acc       AAC    C                 --------  u       g     a 

Annotation confidence Not enough data

Genome context

chr7: 124349-124459 [-]

Mature gma-miR1520d

• Accession: MIMAT0007379
• Description: Glycine max gma-miR1520d mature miRNA
• Sequence: 80 - AUCAGAACAUGACACGUGACAA - 101
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160