Stem-loop gma-MIR1526

Accession

MI0007244

Description

Glycine max gma-MIR1526 precursor miRNA

Gene family

MIPF0001150; MIR4343

Sequence

aacaaaaauuuuauuuuucuucuuccggaucaaguugauccggaucuuccggaucaacuugauccguaagagacuuccggauuaaguugauccagaaguuacggaucaaguuaauccagaagagacuuucggaucaacugauCCGGAAGAGGAAAAUUAAGCAAggauaauuuu
.........((((.((((((((((((((((((.((((((((((((((((.((((.(((((((((((((....(((((.((((((...)))))).)))))))))))))))))).)))).)))))....))))))))))))))))))))))))))))).)))).............

Structure

----aacaaaaau    u                  a           ----     c    c             agag     c      a 
             uuua uuuucuucuuccggauca guugauccgga    ucuuc ggau aacuugauccgua    acuuc ggauua  
             |||| |||||||||||||||||| |||||||||||    ||||| |||| |||||||||||||    ||||| |||||| g
             GAAU AAAAGGAGAAGGCCuagu caacuaggcuu    agaag ccua uugaacuaggcau    ugaag ccuagu  
uuuuaauaggAAC    U                  -           ucag     a    a             ----     a      u 

Annotation confidence Not enough data

Genome context

chr16: 6139320-6139493 [+]

Mature gma-miR1526

• Accession: MIMAT0007388
• Description: Glycine max gma-miR1526 mature miRNA
• Sequence: 143 - CCGGAAGAGGAAAAUUAAGCAA - 164
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160