Stem-loop gma-MIR1528

Accession

MI0007246

Description

Glycine max gma-MIR1528 precursor miRNA

Literature search

1 open access papers mention gma-MIR1528
(1 sentences)

Sequence

ugauuguugaAUAGAUUAGAUCAAUAUAUUAGUaaguuuuuauuagaccaagaugagagucaguuuuuauuggauuaaucugucauaucucaaauuuuauuucauuuaagaacaaaauauaauguuauguuuguaacuauuaaaaaaucaaggagaagaugaaaauuaaauuauauuuuaucuuuaaauaaaauaaaauuuuggguauaacaaauuaguccaauagaaacuuauugauauuuugaucuaaucuauucaccaacca
((.(((.(((((((((((((((((.(((((((((.(((((((((.......)))))))).)((((((((((((((((((.(((.((((((.(((((((((((.(((((((...(((((((((((((((....))))).........(((........))).........))))))))))...))))))).))))))))))).)))))).))).))))))))))))))))))))))))))).))))))))))))))))).))).))

Structure

  a   u                 U         aguuuuuauuagaccaagaugagaguc                  c   c      c           c       aac          guuauguuuguaacuauuaaaa 
ug uug ugaAUAGAUUAGAUCAA AUAUUAGUa                           aguuuuuauuggauuaau ugu auaucu aaauuuuauuu auuuaag   aaaauauaau                      a
|| ||| ||||||||||||||||| |||||||||                           |||||||||||||||||| ||| |||||| ||||||||||| |||||||   ||||||||||                       
ac aac acuuaucuaaucuaguu uauaguuau                           ucaaagauaaccugauua aca uauggg uuuaaaauaaa uaaauuu   uuuuauauua                      a
  c   c                 u         ---------------------------                  a   a      u           a       cua          aauuaaaaguagaagaggaacu 

Annotation confidence Not enough data

Genome context

chr8: 4502473-4502737 [-]

Mature gma-miR1528

• Accession: MIMAT0007390
• Description: Glycine max gma-miR1528 mature miRNA
• Sequence: 11 - AUAGAUUAGAUCAAUAUAUUAGU - 33
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160