Stem-loop mml-mir-20b

Accession

MI0007591

Description

Macaca mulatta mml-mir-20b precursor miRNA

Literature search

2 open access papers mention mml-mir-20b
(5 sentences)

Sequence

3782 reads, 29 reads per million, 8 experiments

aguacCAAAGUGCUCAUAGUGCAGGUAGuuuuggcaugacucUACUGUAGUGUGGGCACUUCCAGuacu
(((((..(((((((((((.(((((..((((.......))))...))))).)))))))))))...)))))

Structure

     -CA           G     -GU    uu 
aguac   AAGUGCUCAUA UGCAG   AGuu  g
|||||   ||||||||||| |||||   ||||  g
ucauG   UUCACGGGUGU AUGUC   ucag  c
     ACC           G     AUc    ua 

Annotation confidence Low

Genome context

chrX: 128132164-128132232 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from mml-mir-20b

Mature mml-miR-20b-5p

• Accession: MIMAT0006164
• Description: Macaca mulatta mml-miR-20b-5p mature miRNA
• Sequence: 6 - CAAAGUGCUCAUAGUGCAGGUAG - 28
• Evidence: experimental ; Illumina [2]

Mature mml-miR-20b-3p

• Accession: MIMAT0026799
• Description: Macaca mulatta mml-miR-20b-3p mature miRNA
• Sequence: 43 - UACUGUAGUGUGGGCACUUCCAG - 65
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45