Stem-loop cfa-mir-98

Accession

MI0008182

Description

Canis familiaris cfa-mir-98 precursor miRNA

Gene family

MIPF0000002; let-7

Sequence

UGAGGUAGUAAGUUGUAUUGUUgugggguagggauuuuaggccccaauuagaagauaacuauacaacuuacuacuuuccc
.(((((((((((((((((.((((((((((...........)))))).........)))).)))))))))))))))))...

Structure

--U                 U    ---------      aggg 
   GAGGUAGUAAGUUGUAU GUUg         uggggu    a
   ||||||||||||||||| ||||         ||||||    u
   uuucaucauucaacaua caau         accccg    u
ccc                 u    agaagauua      gauu 

Annotation confidence Not enough data

Genome context

chrX: 45253693-45253772 [-]

Mature cfa-miR-98

• Accession: MIMAT0006756
• Description: Canis familiaris cfa-miR-98 mature miRNA
• Sequence: 1 - UGAGGUAGUAAGUUGUAUUGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415