Stem-loop sequence osa-MIR812j

Accession MI0008299
Description Oryza sativa miR812j stem-loop
Gene family MIPF0000345; MIR812
Stem-loop 
aga u   ---   ------        --g         uc       c                          u              ug            --       uuu   aaaaacuaaaaaacacaagucacgcauaaacuacu 
   g gca   ucc      uuggucuu   gauaguacu  cuuuguc caaaauaagcguagccaugaguuuuc uguccaacuuuaau  uucgucuuauuu  aauuuuu   uga                                   a
   | |||   |||      ||||||||   |||||||||  ||||||| |||||||||||||||||||||||||| ||||||||||||||  ||||||||||||  |||||||   |||                                   u
   c cgu   agg      gacuagaa   uuaucauga  gaggcag guuuuauuugcgucgguacucaaagg acagguugaaauua  aggcagaauaaa  uuaaaaa   acu                                   u
--a -   aaa   uugauc        agg         ga       u                          c              gu            cu       cau   aaucauaaaaauaacaauaaucuaauauuuuguac
Get sequence
Deep sequencing
23566 reads, 4 experiments
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr8: 19806333-19806629 [+]
intergenic

Mature sequence osa-miR812j

Accession MIMAT0007850
Sequence

200 -  

aagacggaugauuaaaguuggaca

 - 223

Get sequence
Deep sequencing 18572 reads, 4 experiments
Evidence experimental; 454 [1]

References

1
PMID:18687877 "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains" Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C Genome Res. 18:1456-1465(2008).